Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00022140
Genome
Pseudomonas putida - NC_002947.3
TF
IHF [UniProtKB:P0A126, view regulon], [UniProtKB:P0A128, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATCAGCAGCTTG + [1627288, 1627299] 22510163 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details DNA-array expression analysis (ECO:0005525) - 790

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... mucA algN algU nadB algY
Gene Locus tag Description
mucA PP_1428 anti sigma-E protein, RseA
algN PP_1429 sigma E regulatory protein MucB/RseB
algU PP_1427 RNA polymerase sigma factor AlgU
nadB PP_1426 L-aspartate oxidase
algY PP_1430 protease Do