Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00021ea0
Genome
Pseudomonas protegens - NC_004129.6
TF
Zur [UniProtKB:Q4KKK3, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGTTATAATATAACAT - [7012815, 7012831] 22900619 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 776

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PFL_6174 PFL_6173 PFL_6172 PFL_6171 PFL_6175
Gene Locus tag Description
PFL_6174 PFL_6174 RNA polymerase-binding protein DksA
PFL_6173 PFL_6173 CobW/P47K family protein
PFL_6172 PFL_6172 hypothetical protein
PFL_6171 PFL_6171 cobalamin synthesis protein/P47K family protein
PFL_6175 PFL_6175 hypothetical protein