Transcription Factor Binding Site Information

Pseudomonas putida - NC_002947.3
Anr [UniProtKB:Q88F34, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGATCCCCGTCAA + [4835904, 4835917] 18341582 Experimental technique details Ad-hoc quantitative phenotype observation (ECO:0005676) - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 719

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ccoN-1 ccoO-1 ccoQ-1 ccoP-1 PP_4249
Gene Locus tag Description
ccoN-1 PP_4250 cbb3-type cytochrome c oxidase subunit I
ccoO-1 PP_4251 cbb3-type cytochrome c oxidase subunit II
ccoQ-1 PP_4252 cytochrome c oxidase, cbb3-type, CcoQ subunit
ccoP-1 PP_4253 cytochrome c oxidase, cbb3-type subunit III
PP_4249 PP_4249 hypothetical protein