Transcription Factor Binding Site Information

Pseudomonas putida - NC_002947.3
Anr [UniProtKB:Q88F34, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGATCCAGATCAA + [949729, 949742] 18341582 Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 719

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... cyoB cyoA cyoC cyoD cyoE-2 cyoups2 cyoups1
Gene Locus tag Description
cyoB PP_0813 cytochrome o ubiquinol oxidase subunit I
cyoA PP_0812 ubiquinol oxidase subunit II
cyoC PP_0814 cytochrome o ubiquinol oxidase subunit III
cyoD PP_0815 cytochrome o ubiquinol oxidase, protein CyoD
cyoE-2 PP_0816 protoheme IX farnesyltransferase
cyoups2 PP_0811 cyoups2 protein
cyoups1 PP_0810 cyoups1 protein