Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00012d60
Genome
Pseudomonas putida - NC_002947.3
TF
PsrA [UniProtKB:Q88KZ5, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTCAAACGGTAGTTTGAA + [1818322, 1818339] 11914368 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - 649

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... rpoS nlpD
Gene Locus tag Description
rpoS PP_1623 RNA polymerase sigma factor RpoS
nlpD PP_1622 peptidase M23B