Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00012b50
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
AmpR [UniProtKB:P24734, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGGGCTTGAAAATG + [1954751, 1954764] 24157832 Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details qPCR [quantitative real-time] (ECO:0005660) - Experimental technique details RNA-Seq (ECO:0005664) - 647

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... clpX lon hupB PA1804.1 ppiD
Gene Locus tag Description
clpX PA1802 ATP-dependent protease ATP-binding subunit ClpX
lon PA1803 Lon protease
hupB PA1804 DNA-binding protein HU
PA1804.1 PA1804.1 tRNA
ppiD PA1805 peptidyl-prolyl cis-trans isomerase D