Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00012ae0
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
AmpR [UniProtKB:P24734, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TATTCGCCGAACTT + [4455757, 4455770] 24157832 Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details qPCR [quantitative real-time] (ECO:0005660) - Experimental technique details RNA-Seq (ECO:0005664) - 647

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ladS PA3973 PA3972 PA3971 amn thiD thiE hemL
Gene Locus tag Description
ladS PA3974 Lost Adherence Sensor, LadS
PA3973 PA3973 transcriptional regulator
PA3972 PA3972 acyl-CoA dehydrogenase
PA3971 PA3971 hypothetical protein
amn PA3970 AMP nucleosidase
thiD PA3975 phosphomethylpyrimidine kinase
thiE PA3976 thiamine-phosphate pyrophosphorylase
hemL PA3977 glutamate-1-semialdehyde aminotransferase