Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00012ab0
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
AmpR [UniProtKB:P24734, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TCTCCTTTAGGCTT - [4632455, 4632468] 24157832 Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details qPCR [quantitative real-time] (ECO:0005660) - Experimental technique details RNA-Seq (ECO:0005664) - 647

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PA4141 PA4142 PA4143 PA4144 PA4145
Gene Locus tag Description
PA4141 PA4141 hypothetical protein
PA4142 PA4142 secretion protein
PA4143 PA4143 toxin transporter
PA4144 PA4144 hypothetical protein
PA4145 PA4145 transcriptional regulator