Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00012960
Genome
Peptoclostridium difficile - NC_013316.1
TF
LexA [UniProtKB:A0A0H3NC35, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATGAACTATTGTTTTA + [93865, 93880] 24713082 Experimental technique details Comparative genomics search (ECO:0005622) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details Surface plasmon resonance - 645

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... rpoB rpoC
Gene Locus tag Description
rpoB CDR20291_0060 DNA-directed RNA polymerase subunit beta
rpoC CDR20291_0061 DNA-directed RNA polymerase subunit beta'