Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00012920
Genome
Peptoclostridium difficile - NC_013316.1
TF
LexA [UniProtKB:A0A0H3NC35, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGAACTTTAGTTTCT + [4183520, 4183535] 24713082 Experimental technique details Comparative genomics search (ECO:0005622) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details Surface plasmon resonance - 645

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CDR20291_3533 soj spo0J CDR20291_3530
Gene Locus tag Description
CDR20291_3533 CDR20291_3533 stage 0 sporulation protein
soj CDR20291_3532 sporulation initiation inhibitor
spo0J CDR20291_3531 stage 0 sporulation protein J
CDR20291_3530 CDR20291_3530 selenocysteine lyase