Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00012870
Genome
Pseudomonas syringae group genomosp. 3 - NC_004578.1
TF
RhpR [UniProtKB:Q883X4, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GTATCGCGCCGCTTAC + [2220810, 2220825] 20521955 Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details Luciferase reporter assay (ECO:0005648) - Experimental technique details Northern blot (ECO:0005653) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 642

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PSPTO_2036 folE-2 PSPTO_2034
Gene Locus tag Description
PSPTO_2036 PSPTO_2036 lipoprotein
folE-2 PSPTO_2035 GTP cyclohydrolase I
PSPTO_2034 PSPTO_2034 hypothetical protein