Transcription Factor Binding Site Information

Salmonella enterica - NC_016856.1
AraC [UniProtKB:A0A0F6AWN9, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TATGGCTGGAATGTCCACA - [122147, 122165] 24272778 Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details Multiple sequence alignment (MSA) (ECO:0005556) - Experimental technique details RNA-Seq (ECO:0005664) - 629

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... araB araA araD araC yabI
Gene Locus tag Description
araB STM14_0122 ribulokinase
araA STM14_0121 L-arabinose isomerase
araD STM14_0120 L-ribulose-5-phosphate 4-epimerase
araC STM14_0123 DNA-binding transcriptional regulator AraC
yabI STM14_0124 hypothetical protein