Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000f1f0
Genome
Escherichia coli - NC_000913.2
TF
AraC [UniProtKB:P0A9E0, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTTAGCGGGAAAAGACATA + [1984343, 1984361] 24272778 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details Multiple sequence alignment (MSA) (ECO:0005556) - 622

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... araF araG araH ftnB
Gene Locus tag Description
araF b1901 L-arabinose transporter subunit
araG b1900 fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components
araH b4460 fused L-arabinose transporter subunits of ABC superfamily: membrane components
ftnB b1902 ferritin B, probable ferrous iron reservoir