Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000f1b0
Genome
Escherichia coli - NC_000913.2
TF
AraC [UniProtKB:P0A9E0, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CGCAGCAATTTAATCCATA - [2980287, 2980305] 24272778 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details Multiple sequence alignment (MSA) (ECO:0005556) - 622

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... araE ygeA
Gene Locus tag Description
araE b2841 arabinose transporter
ygeA b2840 conserved protein, Asp/Glu_racemase family