Transcription Factor Binding Site Information

Pseudomonas aeruginosa - NC_002516.2
Vfr [UniProtKB:P55222, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CATGCGGAACTGCATCACATTT + [3962080, 3962101] 17159200 Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - 594

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... algD alg8 alg44 algK algE algG algX algL
Gene Locus tag Description
algD PA3540 GDP-mannose 6-dehydrogenase AlgD
alg8 PA3541 alginate biosynthesis protein Alg8
alg44 PA3542 alginate biosynthesis protein Alg44
algK PA3543 alginate biosynthetic protein AlgK
algE PA3544 Alginate production outer membrane protein AlgE
algG PA3545 alginate-c5-mannuronan-epimerase AlgG
algX PA3546 alginate biosynthesis protein AlgX
algL PA3547 poly(beta-D-mannuronate) lyase