Transcription Factor Binding Site Information

Pseudomonas putida - NC_002947.3
PtxS [UniProtKB:Q88HH7, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGAAACCGGTTTCA + [3832240, 3832253] 20581202 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - 591

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PP_3382 PP_3384 PP_3383 PP_3385 vgrG-2 PP_3387 PP_3388 PP_3389
Gene Locus tag Description
PP_3382 PP_3382 gluconate 2-dehydrogenase
PP_3384 PP_3384 gluconate 2-dehydrogenase
PP_3383 PP_3383 gluconate 2-dehydrogenase
PP_3385 PP_3385 hypothetical protein
vgrG-2 PP_3386 vgrG protein
PP_3387 PP_3387 hypothetical protein
PP_3388 PP_3388 hypothetical protein
PP_3389 PP_3389 hypothetical protein