Transcription Factor Binding Site Information

Pseudomonas putida - NC_002947.3
PtxS [UniProtKB:Q88HH7, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGAAACCGGTTTCA + [3824973, 3824986] 20581202 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - 591

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PP_3379 kguK PP_3377 kguD
Gene Locus tag Description
PP_3379 PP_3379 xylose isomerase
kguK PP_3378 PfkB domain-containing protein
PP_3377 PP_3377 major facilitator superfamily transporter
kguD PP_3376 2-ketogluconate 6-phosphate reductase