Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000cef0
Genome
Pseudomonas putida - NC_002947.3
TF
HexR [UniProtKB:Q88P32, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGTGGTTTTTACTA + [1165532, 1165546] 19506074 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - 582

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... zwf-1 hexR pgl eda
Gene Locus tag Description
zwf-1 PP_1022 glucose-6-phosphate 1-dehydrogenase
hexR PP_1021 DNA-binding transcriptional regulator HexR
pgl PP_1023 6-phosphogluconolactonase
eda PP_1024 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase