Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000ca30
Genome
Caulobacter vibrioides - NC_011916.1
TF
Fur [UniProtKB:A0A0H3C2M1, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATTGCGACGGCGCCGCAAC - [32726, 32744] 19520766 Experimental technique details Beta-gal reporter assay - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - 545

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CCNA_00028 CCNA_00027 CCNA_00026 CCNA_00025 CCNA_00024 CCNA_00023 CCNA_00022 CCNA_00021 CCNA_00029 CCNA_00030 vapC vapB
Gene Locus tag Description
CCNA_00028 CCNA_00028 TonB-dependent receptor
CCNA_00027 CCNA_00027 hydroxylase
CCNA_00026 CCNA_00026 PAS-family sensor histidine kinase
CCNA_00025 CCNA_00025 transporter
CCNA_00024 CCNA_00024 multifunctional uroporphyrin-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase
CCNA_00023 CCNA_00023 hypothetical protein
CCNA_00022 CCNA_00022 aerobic-type carbon monoxide dehydrogenase small subunit CoxS
CCNA_00021 CCNA_00021 aerobic-type carbon monoxide dehydrogenase large subunit CoxL
CCNA_00029 CCNA_00029 lysine exporter protein
CCNA_00030 CCNA_00030 ribonuclease
vapC CCNA_00031 toxin protein VapC
vapB CCNA_00032 antitoxin protein VapB