Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000c910
Genome
Caulobacter vibrioides - NC_002696.2
TF
Fur [UniProtKB:A0A0H3C2M1, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATTGCGATTGATTCTGAGA + [2400674, 2400692] 19520766 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - 536

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CC_2194 CC_2193 CC_2192 CC_2191 CC_2195 CC_2196 CC_2197 CC_2198 CC_2199 CC_2200
Gene Locus tag Description
CC_2194 CC_2194 TonB-dependent receptor
CC_2193 CC_2193 hypothetical protein
CC_2192 CC_2192 hypothetical protein
CC_2191 CC_2191 hypothetical protein
CC_2195 CC_2195 DedA family protein
CC_2196 CC_2196 hypothetical protein
CC_2197 CC_2197 Coq7 family protein
CC_2198 CC_2198 peptidase M1 family protein
CC_2199 CC_2199 hypothetical protein
CC_2200 CC_2200 HNH endonuclease