Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000bb90
Genome
Vibrio cholerae - NC_009457.1
TF
IHF [UniProtKB:A5F1W7, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CATCTGTCAATTG + [381071, 381083] 18456804 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - 504

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... tcpA tcpH tcpP tcpB tcpQ tcpC tcpR tcpD tcpS tcpT tcpE tcpF
Gene Locus tag Description
tcpA VC0395_A0353 toxin co-regulated pilin
tcpH VC0395_A0352 toxin co-regulated pilus biosynthesis protein H
tcpP VC0395_A0351 toxin co-regulated pilus biosynthesis protein P
tcpB VC0395_A0354 toxin co-regulated pilus biosynthesis protein B
tcpQ VC0395_A0355 toxin co-regulated pilus biosynthesis protein Q
tcpC VC0395_A0356 toxin co-regulated pilus biosynthesis outer membrane protein C
tcpR VC0395_A0357 toxin co-regulated pilus biosynthesis protein R
tcpD VC0395_A0358 toxin co-regulated pilus biosynthesis protein D
tcpS VC0395_A0359 toxin co-regulated pilus biosynthesis protein S
tcpT VC0395_A0360 toxin co-regulated pilus biosynthesis protein T
tcpE VC0395_A0361 toxin co-regulated pilus biosynthesis protein E
tcpF VC0395_A0362 toxin co-regulated pilus biosynthesis protein F