Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000baf0
Genome
Vibrio cholerae - NC_009456.1
TF
H-NS [UniProtKB:Q9KSX6, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TCGGTAAACC - [566199, 566208] 21169492 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - 502

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ctxA zot ace VC0395_0509 cep rstB2 rstA1 VC0395_0505
Gene Locus tag Description
ctxA VC0395_0512 cholera enterotoxin, A subunit
zot VC0395_0511 zona occludens toxin
ace VC0395_0510 accessory enterotoxin
VC0395_0509 VC0395_0509 hypothetical protein
cep VC0395_0508 colonization factor
rstB2 VC0395_0507 RstB2 protein
rstA1 VC0395_0506 RstA1 protein
VC0395_0505 VC0395_0505 cryptic phage CTXphi transcriptional repressor RstR