Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000b020
Genome
Bacillus anthracis - NC_005945.1
TF
CodY [UniProtKB:Q81WK7, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TCTGAAAATT + [3896857, 3896866] 23292769 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - 498

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... BAS3949 mtnB mtnX mtnW BAS3950 BAS3951 BAS3952 BAS3953
Gene Locus tag Description
BAS3949 BAS3949 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase
mtnB BAS3948 methylthioribulose-1-phosphate dehydratase
mtnX BAS3947 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
mtnW BAS3946 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
BAS3950 BAS3950 hypothetical protein
BAS3951 BAS3951 hypothetical protein
BAS3952 BAS3952 3-hydroxyisobutyrate dehydrogenase
BAS3953 BAS3953 3-hydroxyisobutyrate dehydrogenase