Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000aed0
Genome
Caulobacter vibrioides - NC_002696.2
TF
IolR [UniProtKB:Q9A8Q6, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GGAAATTTTCTTCCA + [955826, 955840] 19096521 Experimental technique details Ad-hoc qualitative phenotype observation (ECO:0005674) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details Random mutagenesis (ECO:0005530) - 492

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CC_0859 CC_0858 CC_0860 CC_0861 CC_0862 CC_0863 CC_0864 CC_0865 CC_0866 CC_0867 CC_0868 CC_0869 CC_0870 CC_0871 CC_0872 CC_0873 CC_0874 CC_0875
Gene Locus tag Description
CC_0859 CC_0859 sugar ABC transporter substrate-binding protein
CC_0858 CC_0858 hypothetical protein
CC_0860 CC_0860 sugar ABC transporter ATP-binding protein
CC_0861 CC_0861 sugar ABC transporter permease
CC_0862 CC_0862 hypothetical protein
CC_0863 CC_0863 hypothetical protein
CC_0864 CC_0864 hypothetical protein
CC_0865 CC_0865 3-oxoacyl-ACP synthase
CC_0866 CC_0866 hypothetical protein
CC_0867 CC_0867 hypothetical protein
CC_0868 CC_0868 hypothetical protein
CC_0869 CC_0869 hypothetical protein
CC_0870 CC_0870 hypothetical protein
CC_0871 CC_0871 hypothetical protein
CC_0872 CC_0872 hypothetical protein
CC_0873 CC_0873 hypothetical protein
CC_0874 CC_0874 hypothetical protein
CC_0875 CC_0875 hemK family protein