Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0000aea0
Genome
Pseudomonas putida - NC_002947.3
TF
PcaR [UniProtKB:Q88N41, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GTTCGATAATCGCAC + [1566275, 1566289] 8083169 Experimental technique details EMSA (ECO:0001807) - Experimental technique details Primer Extension assay (ECO:0005657) - Experimental technique details Random mutagenesis (ECO:0005530) - Experimental technique details Visual sequence inspection (nan) - 489

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... pcaR PP_1374
Gene Locus tag Description
pcaR PP_1375 pca regulon regulatory protein
PP_1374 PP_1374 hypothetical protein