Transcription Factor Binding Site Information

Geobacter sulfurreducens - NC_002939.5
HgtR [UniProtKB:Q747A3, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GATTTGTATACTGTATACAAAA + [123504, 123525] 19939938 Experimental technique details EMSA (ECO:0001807) - Experimental technique details Multiple sequence alignment (MSA) (ECO:0005556) - Experimental technique details Primer Extension assay (ECO:0005657) - 456

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... atpG GSU0107 GSU0106 atpX atpF atpH atpA atpD atpC pdxA GSU0116 GSU0117
Gene Locus tag Description
atpG GSU0112 F0F1 ATP synthase subunit gamma
GSU0107 GSU0107 ParB-like nuclease domain-containing protein
GSU0106 GSU0106 chromosome partitioning ATPase Soj
atpX GSU0108 ATP synthase F0, B' subunit
atpF GSU0109 ATP synthase F0 subunit B
atpH GSU0110 F0F1 ATP synthase subunit delta
atpA GSU0111 F0F1 ATP synthase subunit alpha
atpD GSU0113 F0F1 ATP synthase subunit beta
atpC GSU0114 F0F1 ATP synthase subunit epsilon
pdxA GSU0115 4-hydroxythreonine-4-phosphate dehydrogenase
GSU0116 GSU0116 biosynthetic peptidoglycan transglycosylase
GSU0117 GSU0117 aminotransferase