Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000093b0
Genome
Geobacter sulfurreducens - NC_002939.5
TF
GnfM [UniProtKB:Q74EF9, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGATTGAAAAAGCGGCA + [1011322, 1011338] 20660485 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 451

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... gnfK amtB glnK GSU0938 hisN GSU0943
Gene Locus tag Description
gnfK GSU0941 nitrogen fixation transcript antitermination sensor histidine kinase
amtB GSU0940 ammonium transporter
glnK GSU0939 nitrogen regulatory protein P-II
GSU0938 GSU0938 hypothetical protein
hisN GSU0942 histidinol-phosphate phosphatase
GSU0943 GSU0943 PilZ domain-containing protein