Transcription Factor Binding Site Information

Salmonella enterica - NC_004631.1
OmpR [UniProtKB:P0AA16, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGTAAC + [4154806, 4154812] 23190111 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details RNA-Seq (ECO:0005664) - 446

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ompR greB t4002 envZ pckA
Gene Locus tag Description
ompR t4004 osmolarity response regulator
greB t4003 transcription elongation factor GreB
t4002 t4002 transcription accessory protein
envZ t4005 osmolarity sensor protein
pckA t4006 phosphoenolpyruvate carboxykinase