Transcription Factor Binding Site Information

Salmonella enterica - NC_004631.1
OmpR [UniProtKB:P0AA16, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGTTACA + [1840331, 1840337] 23190111 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details Motif-discovery (ECO:0005558) - 431

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... csgB csgA csgC t1774 t1773 t1772 mdoC csgD csgE csgF csgG t1782 t1783 t1784 t1785
Gene Locus tag Description
csgB t1777 curlin minor subunit
csgA t1776 cryptic curlin major subunit
csgC t1775 autoagglutination protein
t1774 t1774 hypothetical protein
t1773 t1773 RNase III inhibitor
t1772 t1772 hypothetical protein
mdoC t1771 glucans biosynthesis protein
csgD t1778 DNA-binding transcriptional regulator CsgD
csgE t1779 curli assembly protein CsgE
csgF t1780 curli assembly protein CsgF
csgG t1781 assembly/transport component in curli production
t1782 t1782 hypothetical protein
t1783 t1783 hypothetical protein
t1784 t1784 hydrolase
t1785 t1785 2-hydroxyacid dehydrogenase