Transcription Factor Binding Site Information

Salmonella enterica - NC_004631.1
OmpR [UniProtKB:P0AA16, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGTTACA + [1382277, 1382283] 23190111 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details Motif-discovery (ECO:0005558) - 431

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... tppB gst pdxY tyrS pdxH ydhA anmK nth ydgQ t1323 rnfD t1325 t1326 t1327 t1328 t1329
Gene Locus tag Description
tppB t1320 tripeptide transporter permease
gst t1319 glutathionine S-transferase
pdxY t1318 pyridoxamine kinase
tyrS t1317 tyrosyl-tRNA synthetase
pdxH t1316 pyridoxamine 5'-phosphate oxidase
ydhA t1315 lipoprotein
anmK t1314 anhydro-N-acetylmuramic acid kinase
nth t1321 endonuclease III
ydgQ t1322 electron transport complex RsxE subunit
t1323 t1323 electron transport complex protein RnfG
rnfD t1324 electron transport complex protein RnfD
t1325 t1325 electron transport complex protein RnfC
t1326 t1326 electron transport complex protein RnfB
t1327 t1327 Na(+)-translocating NADH-quinone reductase subunit E
t1328 t1328 hypothetical protein
t1329 t1329 oriC-binding nucleoid-associated protein