Transcription Factor Binding Site Information

Bacillus subtilis - NC_000964.3
LexA [UniProtKB:P31080, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AAAACGTAAGTTCG + [1704903, 1704916] 16267290 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - 348

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... fliP fliZ cheY fliY fliM fliL ylzI flgG flgD fliK ylxF fliJ fliI fliH fliQ fliR flhB flhA flhF ylxH cheB cheA cheW cheC cheD sigD ylxL
Gene Locus tag Description
fliP BSU16350 flagellar biosynthesis protein FliP
fliZ BSU16340 flagella biosynthesis protein FliZ
cheY BSU16330 regulator of chemotaxis and motility
fliY BSU16320 flagellar motor switch protein
fliM BSU16310 flagellar motor switch protein FliM
fliL BSU16300 flagellar basal body protein FliL
ylzI BSU16299 flagellar protein
flgG BSU16290 flagellar basal body rod protein FlgG
flgD BSU16280 flagellar basal body rod modification protein
fliK BSU16270 flagellar hook-length control protein
ylxF BSU16260 kinesin-like protein
fliJ BSU16250 flagellar biosynthesis chaperone
fliI BSU16240 flagellum-specific ATP synthase
fliH BSU16230 flagellar assembly protein H
fliQ BSU16360 flagellar biosynthesis protein FliQ
fliR BSU16370 flagellar biosynthesis protein FliR
flhB BSU16380 flagellar biosynthesis protein FlhB
flhA BSU16390 flagellar biosynthesis protein FlhA
flhF BSU16400 flagellar biosynthesis regulator FlhF
ylxH BSU16410 flagellar assembly machinery protein
cheB BSU16420 chemotaxis-specific methylesterase
cheA BSU16430 chemotactic two-component sensor histidine kinase
cheW BSU16440 modulation of CheA activity in response to attractants (chemotaxis)
cheC BSU16450 signal terminating phosphatase
cheD BSU16460 sequence specific deamidase
sigD BSU16470 RNA polymerase sigma factor SigD
ylxL BSU16480 coupling factor for flagellin transcription and translation