Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00005bf0
Genome
Yersinia pestis - NC_003143.1
TF
PhoP [UniProtKB:A0A0B6P4W3, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGTCTATAGCCTGTTTAT + [587112, 587129] 18366809 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - 342

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... tnp YPO0542
Gene Locus tag Description
tnp YPO0541 transposase for the IS1541 insertion element
YPO0542 YPO0542 hypothetical protein