Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00005720
Genome
Corynebacterium glutamicum - NC_006958.1
TF
LexA [UniProtKB:A0A072Z841, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TCAAAAAAGTGGTCTA + [832472, 832487] 19372162 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 316

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... cg0898 cg0899 pdxR
Gene Locus tag Description
cg0898 cg0898 pyridoxal biosynthesis lyase PdxS
cg0899 cg0899 glutamine amidotransferase subunit PdxT
pdxR cg0897 pyridoxine biosynthesis transcriptional regulator, aminotransferase