Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00005710
Genome
Corynebacterium glutamicum - NC_006958.1
TF
LexA [UniProtKB:A0A072Z841, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTCGCACATTTTTTCT - [1776823, 1776838] 19372162 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 316

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... cg1884 cg1883 cg1881 cgtRNA_3562 cgtRNA_3563 cgtRNA_3564 cgtRNA_3565 cgtRNA_3566 cgtRNA_3567
Gene Locus tag Description
cg1884 cg1884 hypothetical protein
cg1883 cg1883 hypothetical protein
cg1881 cg1881 iron-dependent peroxidase, protein
cgtRNA_3562 cgtRNA_3562 tRNA
cgtRNA_3563 cgtRNA_3563 tRNA
cgtRNA_3564 cgtRNA_3564 tRNA
cgtRNA_3565 cgtRNA_3565 tRNA
cgtRNA_3566 cgtRNA_3566 tRNA
cgtRNA_3567 cgtRNA_3567 tRNA