Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00005500
Genome
Corynebacterium glutamicum - NC_006958.1
TF
LexA [UniProtKB:A0A072Z841, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGAAGATATGTACGA + [1225238, 1225253] 19372162 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 316

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... cg1319 cg1318 cg1317 cg1316
Gene Locus tag Description
cg1319 cg1319 DNA repair ATPase
cg1318 cg1318 DNA repair exonuclease
cg1317 cg1317 hypothetical protein
cg1316 cg1316 SNF2 family DNA/RNA helicase