Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00005410
Genome
Aliivibrio fischeri - NC_006840.2
TF
Fur [UniProtKB:Q5E6P1, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATAATAATAATAAAACCC + [2446480, 2446497] 23315731 Experimental technique details Ad-hoc quantitative phenotype observation (ECO:0005676) - Experimental technique details Beta-gal reporter assay - Experimental technique details PSSM site search (ECO:0005659) - 310

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... litR hpt
Gene Locus tag Description
litR VF_2177 quorum sensing transcriptional regulator LitR
hpt VF_2176 hypoxanthine phosphoribosyltransferase