Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00004c90
Genome
Helicobacter pylori - NC_011333.1
TF
Fur [UniProtKB:B5Z6G7, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TAATAATGCTTTTTA + [62565, 62579] 22507395 Experimental technique details EMSA (ECO:0001807) - Experimental technique details Multiple sequence alignment (MSA) (ECO:0005556) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 252

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... HPG27_51 putP HPG27_49 HPG27_48 HPG27_52
Gene Locus tag Description
HPG27_51 HPG27_51 proline/delta1-pyrroline-5-carboxylate dehydrogenase
putP HPG27_50 sodium/proline symporter
HPG27_49 HPG27_49
HPG27_48 HPG27_48 hypothetical protein
HPG27_52 HPG27_52 hypothetical protein