Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00004070
Genome
Caulobacter vibrioides - NC_002696.2
TF
LexA [UniProtKB:Q9A724, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CGCGTTCATCATGTGTTCT + [3500343, 3500361] 18083815 Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 158

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CC_3238 CC_3237 ruvB CC_3235 CC_3234 CC_3239
Gene Locus tag Description
CC_3238 CC_3238 holliday junction resolvase
CC_3237 CC_3237 holliday junction DNA helicase RuvA
ruvB CC_3236 Holliday junction DNA helicase B
CC_3235 CC_3235 hypothetical protein
CC_3234 CC_3234 hypothetical protein
CC_3239 CC_3239 hypothetical protein