Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00003fc0
Genome
Caulobacter vibrioides - NC_002696.2
TF
LexA [UniProtKB:Q9A724, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CATGTTCCCTTTCTGTTTC - [2245300, 2245318] 18083815 Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 158

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CC_2040 CC_2039 CC_2041
Gene Locus tag Description
CC_2040 CC_2040 DEAD/DEAH box helicase
CC_2039 CC_2039 hypothetical protein
CC_2041 CC_2041 hypothetical protein