Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00003f50
Genome
Caulobacter vibrioides - NC_002696.2
TF
LexA [UniProtKB:Q9A724, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AGATTTCTTGTTTTGTTCC + [2126500, 2126518] 18083815 Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 158

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CC_1927 dnaE CC_1928 CC_1929 CC_1930 CC_1931
Gene Locus tag Description
CC_1927 CC_1927 hypothetical protein
dnaE CC_1926 DNA polymerase III subunit alpha
CC_1928 CC_1928 inosine-uridine preferring nucleoside hydrolase
CC_1929 CC_1929 ABC transporter ATP-binding protein
CC_1930 CC_1930 hypothetical protein
CC_1931 CC_1931 prolyl-tRNA synthetase