Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00003f00
Genome
Caulobacter vibrioides - NC_002696.2
TF
LexA [UniProtKB:Q9A724, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AAAGTTCGCGTTATGTTCT + [693913, 693931] 18083815 Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 158

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CC_0627 CC_0626 CC_0625 CC_0624 CC_0623 CC_0622 CC_0621 CC_0620 CC_t05
Gene Locus tag Description
CC_0627 CC_0627 hypothetical protein
CC_0626 CC_0626 hypothetical protein
CC_0625 CC_0625 ISCc3 transposase OrfA
CC_0624 CC_0624 ISCc3 transposase OrfB
CC_0623 CC_0623 hypothetical protein
CC_0622 CC_0622 hypothetical protein
CC_0621 CC_0621 type I restriction-modification system subunit S
CC_0620 CC_0620 type I restriction-modification system, M subunit
CC_t05 CC_t05 tRNA