Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00002030
Genome
Aliivibrio salmonicida - NC_011312.1
TF
Fur [UniProtKB:B6EHL8, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATTCTAATTGAGAATTATT + [2000088, 2000106] 20437149 Experimental technique details EMSA (ECO:0001807) - Experimental technique details Northern blot (ECO:0005653) - Experimental technique details PSSM site search (ECO:0005659) - 95

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... 2000000 VSAL_I1864 motY gloA nth rnfE rnfG rnfD rnfC rnfB rnfA
Gene Locus tag Description
VSAL_I1864 VSAL_I1864 outer membrane protein
motY VSAL_I1863 sodium-type flagellar protein MotY precursor
gloA VSAL_I1865 lactoylglutathione lyase
nth VSAL_I1866 endonuclease III
rnfE VSAL_I1867 electron transport complex protein RsxE
rnfG VSAL_I1868 electron transport complex protein RnfG
rnfD VSAL_I1869 electron transport complex protein RnfD
rnfC VSAL_I1870 electron transport complex protein RnfC
rnfB VSAL_I1871 electron transport complex protein RnfB
rnfA VSAL_I1872 Na(+)-translocating NADH-quinone reductase subunit E