Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00001490
Genome
Pseudomonas putida - NC_002947.3
TF
LexA [UniProtKB:P0A153, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CTGTCTATGCATACAG + [4415761, 4415776] 17933893 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 60

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PP_3901 hicB-2 hicA-2
Gene Locus tag Description
PP_3901 PP_3901 hypothetical protein
hicB-2 PP_3899 hicB protein
hicA-2 PP_3900 hicA protein