Transcription Factor Binding Site Information

Vibrio cholerae - NC_009457.1
AphB [UniProtKB:Q9KT56, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGCAACATAATGTGTCA - [610687, 610703] 11972789 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 54

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... VC0395_A0567 VC0395_A0568 VC0395_A0566
Gene Locus tag Description
VC0395_A0567 VC0395_A0567 LysR family transcriptional regulator
VC0395_A0568 VC0395_A0568 response regulator
VC0395_A0566 VC0395_A0566 hypothetical protein