Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000011e0
Genome
Yersinia pestis - NC_003143.1
TF
CRP [UniProtKB:Q7CFV3, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AAATCGTGATCCTAATCACTGTT + [1253133, 1253155] 18710863 Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details Primer Extension assay (ECO:0005657) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 43

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... sdhC gltA sdhD sdhA sdhB
Gene Locus tag Description
sdhC YPO1109 succinate dehydrogenase cytochrome b556 large membrane subunit
gltA YPO1108 type II citrate synthase
sdhD YPO1110 succinate dehydrogenase cytochrome b556 small membrane subunit
sdhA YPO1111 succinate dehydrogenase flavoprotein subunit
sdhB YPO1112 succinate dehydrogenase iron-sulfur subunit