Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00000ca0
Genome
Yersinia pestis - NC_004088.1
TF
PhoP [UniProtKB:A0A0B6P4W3, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CCGTTTATTTTTTGTTAAG + [498938, 498956] 20661307 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 14

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... y0447 cstA
Gene Locus tag Description
y0447 y0447 hypothetical protein
cstA y0446 carbon starvation protein