Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00000c40
Genome
Yersinia pestis - NC_004088.1
TF
PhoP [UniProtKB:A0A0B6P4W3, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TCGTTATAGAACTGTTTAA + [2826267, 2826285] 20661307 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 14

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... pagP y5003
Gene Locus tag Description
pagP y2563 palmitoyl transferase
y5003 y5003 cold shock-like protein CspC