Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000006e0
Genome
Vibrio cholerae - NC_002505.1
TF
RpoN [UniProtKB:Q9KP49, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGGCACGTTTACTGC + [1212888, 1212902] 22723378 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details RNA-Seq (ECO:0005664) - 10

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... clpS VC1142 clpA
Gene Locus tag Description
clpS VC1143 ATP-dependent Clp protease adaptor protein ClpS
VC1142 VC1142 cold shock-like protein CspD
clpA VC1144 ATP-dependent Clp protease ATP-binding subunit