Transcription Factor Binding Site Information

Vibrio cholerae - NC_002505.1
Fur [UniProtKB:P0C6C8, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CAACTGAAAATGTTTCTCAAG + [243845, 243865] 21750152 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details Motif-discovery (ECO:0005558) - 2

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... VC0239 VC0238 VC0237 VC0236 VC0235 VC0234 VC0233 VC0232 VC0231 VC0230 VC0229 VC0228 VC0227 VC0226 VC0225 VC0224 rfaD
Gene Locus tag Description
VC0239 VC0239 hypothetical protein
VC0238 VC0238 hexapaptide repeat-containing transferase
VC0237 VC0237 hypothetical protein
VC0236 VC0236 ADP-heptose--LPS heptosyltransferase II
VC0235 VC0235 lipopolysaccharide biosynthesis protein
VC0234 VC0234 hypothetical protein
VC0233 VC0233 3-deoxy-D-manno-octulosonic-acid transferase
VC0232 VC0232 hypothetical protein
VC0231 VC0231 hypothetical protein
VC0230 VC0230 hypothetical protein
VC0229 VC0229 hypothetical protein
VC0228 VC0228 hypothetical protein
VC0227 VC0227 3-deoxy-D-manno-octulosonic-acid kinase
VC0226 VC0226 hypothetical protein
VC0225 VC0225 lipopolysaccharide biosynthesis protein
VC0224 VC0224 lipopolysaccharide biosynthesis glycosyltransferase
rfaD VC0240 ADP-L-glycero-D-manno-heptose-6-epimerase